Healthy Gluten Free Pecan Pie Bars (dairy free!)
Holiday dessert tables have a way of looking the same every single year. Pumpkin pie, apple pie, and that gorgeous classic pecan pie in the middle, shiny and caramel colored and completely off limits if you are eating gluten free or dairy free. Sound familiar? These healthy gluten free pecan pie bars were made for exactly that moment.
They take everything you love about pecan pie, the buttery shortbread base, the soft caramel filling, the toasted pecans on top, and pack it all into an easy bar you can cut into neat squares. No rolling dough. No crimping crust. No guessing whether the center is set.
The bars are gluten free, grain free, and dairy free, and they skip refined sugar and refined flour completely. You need just 6 main ingredients, one bowl, and one baking dish. That is it.
Compared to a traditional pecan pie, this recipe is far less daunting. You mix the shortbread crust, press it into a lined pan, bake it until the edges turn golden, then pour over a simple whisked filling and bake again until it sets.
The whole thing goes into the fridge to chill so the bars slice cleanly, and from there it is as simple as cutting and serving.
If you have ever brought your own gluten free dessert to a holiday gathering just to make sure there is something safe on the table, you already know the routine. This is the recipe that changes it.
It fits right into the pie category, it looks festive on a platter, and it tastes rich and buttery enough that nobody at the table will guess it is any healthier than the pie next to it.
Serve it next to Pecan Pie Bars if your crowd wants options, or keep it as the one dessert you bring all season long. Either way, it earns its spot on the table.
Jump To
- 1. Healthy Gluten Free Pecan Pie Bars (dairy free!)
- 2. Why You’ll Love This Recipe
- 3. What You’ll Need to Make These Gluten Free Pecan Pie Bars
- 4. How to Make Healthy Gluten Free Pecan Pie Bars
- 5. Can I Make These Vegan?
- 6. Switch Up the Flavor of Your Pecan Pie Bars
- 7. Storage Tips
- 8. Ingredients
- 9. Instructions
- 10. Recipe details
- 11. FAQs
- 12. Healthy Gluten-Free Pecan Pie Bars
Why You’ll Love This Recipe
There are three big reasons these bars keep showing up on holiday tables.
- Healthier ingredients, classic flavor. The bars are made without refined sugar and without flour, yet the filling still tastes like a traditional pecan pie. The maple syrup and coconut sugar bring that warm caramel note, and the almond flour crust stays buttery and tender.
- Quick and genuinely easy. The crust and filling come together fast, and the whole pan is ready for the oven in under 15 minutes. One bowl handles the crust, and the filling comes together while the crust bakes.
- Versatile and customizable. A splash of bourbon adds a rich, warm depth, and a layer of chocolate chips turns the bars into something closer to a chocolate pecan treat. Both are optional, and both are delicious.
That combination of simple, fast, and flexible is what makes this recipe worth keeping in your holiday rotation.

What You’ll Need to Make These Gluten Free Pecan Pie Bars
Each ingredient has a job, and knowing what it does makes the recipe easier to shop for and easier to adjust.
- Almond flour. This is the base of the shortbread crust. It gives the bars a rich, buttery flavor and keeps everything gluten free and grain free.
- Coconut oil. Used in both the crust and the filling, it adds moisture and healthy fats and helps the filling set into that classic pecan pie texture.
- Maple syrup. A natural sweetener that pairs beautifully with pecans and keeps the flavor warm rather than sharp.
- Coconut sugar. This is what gives the filling its subtle caramel like flavor, which is exactly what makes pecan pie taste like pecan pie. Brown sugar works here too.
- Eggs. They bind the filling and create the signature pecan pie texture that holds up so well when the bars are sliced. Room temperature eggs are very important for a smooth filling.
- Pecans. The star of the show. Chopped pecans add crunch and warmth to every single bite.
Beyond those six, you will want vanilla extract for both the crust and the filling. It is optional but recommended, and it rounds out the flavor nicely.
How to Make Healthy Gluten Free Pecan Pie Bars
The process is short, and it happens in three simple stages.
- Make the crust. Mix all the crust ingredients together, press the mixture into a parchment lined pan, and bake until it turns golden brown.
- Make the filling. While the crust bakes, whisk the filling ingredients together and fold in the chopped pecans.
- Assemble and bake. Pour the filling over the warm crust, return the pan to the oven, and bake until the filling is set. Let the bars cool, then chill before slicing.
If you can stir and press, you can make these. The full step by step details are in the recipe card below.

Can I Make These Vegan?
Yes, and the swap is simple. Replace the two eggs with a flax egg made from 2 tablespoons of flaxseed meal mixed with 6 tablespoons of water.
Let the mixture sit for a few minutes until it thickens and turns gel like, then use it in the filling exactly where the eggs would go. The filling still sets, and the bars keep their soft, caramel texture.
Switch Up the Flavor of Your Pecan Pie Bars
Once you have the base recipe down, it is fun to play with it.
- Bourbon. Add 1 tablespoon of bourbon to the filling for a rich, warm flavor that leans a little more grown up.
- Chocolate chips. Sprinkle 1/2 cup of chocolate chips over the baked crust before you pour in the filling. They melt into a chocolatey surprise in the middle of each bar.
Both options fold right into the same method, so you can make one pan plain and one pan dressed up. If you love pecan desserts in every form, a No Bake Keto Pecan Cream Pie is another fun one to keep in your back pocket.
Storage Tips
These bars keep beautifully, which is one more reason to make them ahead for a busy holiday week.
- Refrigerator: Store the bars in an airtight container in the fridge for up to 1 week.
- Freezer: Freeze them for up to 3 months. Wrap them well, then thaw in the fridge before serving.
Chilling the bars before slicing is what gives you those clean, bakery style squares. Warm bars will crumble and slump.
Ingredients
Here is everything you need for one 9×9 inch pan of bars. The recipe makes 16 squares.
For the shortbread crust
- 2 cups almond flour
- 1/4 cup melted coconut oil
- 1/4 cup maple syrup
- 1 teaspoon vanilla extract, optional but recommended
For the pecan pie filling
- 1/2 cup coconut sugar or brown sugar
- 1/4 cup melted coconut oil
- 1/4 cup maple syrup
- 2 teaspoons vanilla extract, optional but recommended
- 2 eggs at room temperature, very important
- 1 1/2 cups chopped pecans, raw and unsalted
Equipment stays minimal too: one large bowl and one 9×9 inch baking pan. Recipe adapted from the original gluten free pecan pie bars.
Instructions
Preheat the oven to 350°F and line a 9×9 inch baking pan with parchment paper.
- Mix the crust. Add all the shortbread crust ingredients to a large bowl and mix until combined.
- Press and bake the crust. Transfer the crust mixture to the prepared pan and press it into an even layer over the base. Bake for 10 minutes, or until the edges are lightly golden brown.
- Make the filling. While the crust bakes, whisk together the coconut sugar, coconut oil, maple syrup, vanilla extract, and eggs. Once combined, mix in the chopped pecans.
- Assemble and bake again. When the crust is finished, remove it from the oven and pour the filling over the top. Bake for another 20 to 25 minutes, or until the filling is set. Remove from the oven and let the bars cool in the pan for at least 30 minutes.
- Chill, slice, and serve. Once the pan is cool, transfer it to the fridge and chill for about an hour. Remove the bars from the pan, cut into 16 squares, and serve. Leftovers keep in the fridge for up to 1 week.
A few notes that make a real difference. Use room temperature eggs so the filling blends smoothly. Press the crust firmly and evenly, because a loose crust crumbles when you slice it. And do not rush the chill time. That hour in the fridge is what turns a soft filling into clean, sliceable bars.
Per serving, based on 1 bar: 272 calories, 44 grams of carbohydrates, 2.5 grams of protein, 10 grams of fat, and 26 grams of sugar.
Recipe details
Prep time is 10 minutes and cook time is 35 minutes, for a total time of 45 minutes. One pan makes 16 servings.
| Detail | Amount |
|---|---|
| Prep time | 10 minutes |
| Cook time | 35 minutes |
| Total time | 45 minutes |
| Servings | 16 bars |
| Pan size | 9×9 inch |
| Oven temperature | 350°F |
These bars are the kind of dessert that disappears fast at a holiday gathering, and nobody has to know how simple they were to pull together.
FAQs
Can I make gluten free pecan pie bars vegan?
Yes, use a flax egg in place of the two eggs. Mix 2 tablespoons of flaxseed meal with 6 tablespoons of water and let it sit for a few minutes until thickened. The bars will still be gluten-free, grain-free, and dairy-free, though the filling may be slightly softer.
Can I substitute butter for coconut oil in pecan pie bars?
Yes, melted butter can replace the melted coconut oil in equal amounts if you do not need the bars to be dairy-free. Use 1/4 cup melted butter in the shortbread crust and 1/4 cup melted butter in the filling. This swap keeps the same texture and adds a richer, more traditional flavor.
How do you store gluten free pecan pie bars?
Store the cooled, chilled bars in an airtight container in the refrigerator for up to 1 week. For longer storage, wrap them tightly and freeze for up to 3 months. Thaw frozen bars in the refrigerator or at room temperature before serving.
Why are my pecan pie bars runny?
Runny bars usually mean the filling was not baked long enough or was cut before chilling. Bake the assembled bars at 350°F for 20 to 25 minutes until the filling is set, then cool them in the pan for at least 30 minutes and chill for about an hour before slicing. If they still seem soft, check your oven temperature with an oven thermometer.

Healthy Gluten-Free Pecan Pie Bars
- Total Time: 45 min
- Yield: 16 bars 1x
Description
Healthy Gluten Free Pecan Pie Bars (dairy free! ) Holiday dessert tables have a way of looking the same every single year.
Ingredients
For the shortbread crust:
2 cups almond flour
1/4 cup coconut oil, melted
1/4 cup maple syrup
1 teaspoon vanilla extract
For the pecan pie filling:
1/2 cup coconut sugar
1/4 cup coconut oil, melted
1/4 cup maple syrup
2 teaspoons vanilla extract
2 eggs, at room temperature
1 1/2 cups pecans, chopped, raw and unsalted
Instructions
1-Preheat oven to 350° Fahrenheit and line: Preheat oven to 350° Fahrenheit and line a 9×9-inch baking pan with parchment paper.
2-Add all shortbread crust ingredients to a: Add all shortbread crust ingredients to a large bowl and mix to combine. Then, transfer the crust to your prepared baking pan and press the crust down into an even layer over the base of the dish. Bake for 10 minutes or until lightly golden brown around the edges.
3-While the crust bakes, make the filling: While the crust bakes, make the filling by whisking together the coconut sugar, coconut oil, maple syrup, vanilla extract, and eggs. Once that’s combined, mix in the chopped pecans.
4-When the crust is finished baking, remove: When the crust is finished baking, remove it from the oven and pour the pecan pie filling mixture over the crust. Bake again for 20-25 minutes, or until the filling is set. Remove the bars from the oven and let cool for at least 30 minutes in the pan.
5-Once the pan is cool, transfer the: Once the pan is cool, transfer the bars to the fridge to chill for about an hour. Then, remove the bars from the pan and cut into 16 squares. Serve immediately or store in the fridge for up to 1 week!
- Prep Time: 10 min
- Cook Time: 35 min
- Method: bake
Nutrition
- Serving Size: 1 bar
- Calories: 272
- Sugar: 26
- Fat: 10
- Carbohydrates: 44
- Protein: 2.5
Keywords: Healthy Gluten-Free Pecan Pie Bars

